Nope. The Green represents that Pakistan is nation of the Ahl-e-As-Sunnah Wa'al Jamma'at (Sunni Muslims).
Pakistan's founder Qaid-e-Azam Muhammad Ali Jinnah disowned his own beloved daughter simply because she married a Christian. This is how much respect Qaid-e-Azam had for the minorities.
The actual name Pakistan, means Land of the Pure, was named as such because all non-Muslims of Bar-e-Saghir were considered impure. When the Founding Fathers of Pakistan were considering this name, they had also considered naming the Islamic Republic as 'Islamistan' just in case the British did not the allow the name, Pakistan.
What all this means is that the Islamic Republic of Pakistan was created in the Name of Islam and created for the Muslims of Bar-e-Saghir.
Now if some Kafirs goes around telling the Muslims of Pakistan, who sacrificed millions to create this Muslim country in the first place what "true Islam" is, or what "secular Pakistan" is all about, or how to be a "moderate Muslim", then they'll be dealt with.